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  5. lcl|LHPG02000007.1_cds_PRW56915.1_9094

lcl|LHPG02000007.1_cds_PRW56915.1_9094 (PRW56915)


Aliases : PRW56915

Description : Tubulin folding cofactor B


Gene families : OG_01_0001405 (OrthoFinder) Phylogenetic Tree(s): OG0001405_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000007.1_cds_PRW56915.1_9094
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Cre15.g636300 30783533, CPN2 Cytoskeleton.actin and tubulin folding.post-CCT Tubulin... 0.02 OrthoFinder
Dusal.0118s00014.1 33199949 Ubiquitin-like domain; CAP Gly-rich domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
CC GO:0043625 delta DNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 32 117
IPR000938 CAP-Gly_domain 203 266
No external refs found!