lcl|LHPG02000006.1_cds_PRW57953.1_8633 (PRW57953)

Aliases : PRW57953

Description : YbaK/aminoacyl-tRNA synthetase-associated domain; Serine proteases, trypsin domain; 3'-5' exonuclease domain [Interproscan].

Gene families : OG_01_0000494 (OrthoFinder) Phylogenetic Tree(s): OG0000494_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000006.1_cds_PRW57953.1_8633
Cluster	HCCA: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method	Actions
PTI_05G04440.1	No alias	3'-5' exonuclease domain [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0002161	aminoacyl-tRNA editing activity	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004252	serine-type endopeptidase activity	IEA	Interproscan
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004527	exonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
MF	GO:0008408	3'-5' exonuclease activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000347	THO complex	IEP	Enrichment
CC	GO:0000445	THO complex part of transcription export complex	IEP	Enrichment
MF	GO:0003712	transcription coregulator activity	IEP	Enrichment
MF	GO:0004827	proline-tRNA ligase activity	IEP	Enrichment
MF	GO:0005315	inorganic phosphate transmembrane transporter activity	IEP	Enrichment
MF	GO:0005524	ATP binding	IEP	Enrichment
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Enrichment
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0006817	phosphate ion transport	IEP	Enrichment
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Enrichment
BP	GO:0015074	DNA integration	IEP	Enrichment
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Enrichment
CC	GO:0016592	mediator complex	IEP	Enrichment
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Enrichment
MF	GO:0022804	active transmembrane transporter activity	IEP	Enrichment
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Enrichment
BP	GO:0042254	ribosome biogenesis	IEP	Enrichment
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
BP	GO:0044085	cellular component biogenesis	IEP	Enrichment
MF	GO:0051536	iron-sulfur cluster binding	IEP	Enrichment
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Enrichment
MF	GO:0051540	metal cluster binding	IEP	Enrichment
MF	GO:0070403	NAD+ binding	IEP	Enrichment
BP	GO:0090304	nucleic acid metabolic process	IEP	Enrichment
CC	GO:0140513	nuclear protein-containing complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001254	Trypsin_dom	321	511
IPR002562	3'-5'_exonuclease_dom	1110	1177
IPR007214	YbaK/aa-tRNA-synth-assoc-dom	605	705

External Links

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lcl|LHPG02000006.1_cds_PRW57953.1_8633 (PRW57953)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation