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  5. lcl|LHPG02000006.1_cds_PRW57652.1_8686

lcl|LHPG02000006.1_cds_PRW57652.1_8686 (PRW57652)


Aliases : PRW57652

Description : 3-oxoacyl-[acyl-carrier] synthase chloroplastic isoform B


Gene families : OG_01_0000302 (OrthoFinder) Phylogenetic Tree(s): OG0000302_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000006.1_cds_PRW57652.1_8686
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_57820 57820 Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR014030 Ketoacyl_synth_N 59 318
IPR014031 Ketoacyl_synth_C 326 438
IPR015353 Rubisco_LSMT_subst-bd 783 901
No external refs found!