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  5. lcl|LHPG02000005.1_cds_PRW58636.1_7706

lcl|LHPG02000005.1_cds_PRW58636.1_7706 (PRW58636)


Aliases : PRW58636

Description : Pleiotropic drug resistance 1-like


Gene families : OG_01_0000300 (OrthoFinder) Phylogenetic Tree(s): OG0000300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000005.1_cds_PRW58636.1_7706
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Cre09.g395750 30780533 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58352.1_7937 PRW58352 ATP-binding cassette transporter 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Enrichment
CC GO:0000445 THO complex part of transcription export complex IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Enrichment
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Enrichment
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 940 1149
IPR013525 ABC_2_trans 1617 1832
IPR003439 ABC_transporter-like_ATP-bd 584 771
IPR003439 ABC_transporter-like_ATP-bd 1315 1472
IPR010929 PDR_CDR_ABC 1850 1892
No external refs found!