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  5. lcl|LHPG02000005.1_cds_PRW58431.1_8010

lcl|LHPG02000005.1_cds_PRW58431.1_8010 (PRW58431)


Aliases : PRW58431

Description : LOV domain-containing


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000005.1_cds_PRW58431.1_8010
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000640.11 tig00000640_g2766.t1 Probable histidine kinase 4 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cpa|evm.model.tig00020538.57 tig00020538_g10365.t1 Probable ethylene response sensor 1 OS=Oryza sativa subsp. indica 0.03 OrthoFinder
Cz19g01300.t1 No alias Hypothetical protein 0.04 OrthoFinder
Dusal.0365s00004.1 33194892 Signal transduction response regulator, receiver domain... 0.03 OrthoFinder
PTI_18G01300.1 No alias Histidine kinase/HSP90-like ATPase [Interproscan]. 0.03 OrthoFinder
Sro346_g122750.1 Contig4731.g35102 Hybrid signal transduction histidine kinase J 0.02 OrthoFinder
Sro508_g156640.1 Contig2824.g22619 Hybrid signal transduction histidine kinase K 0.02 OrthoFinder
Transcript_contig_89432 89432 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.05 OrthoFinder
Vocar.0009s0380.1 32893358 Histidine kinase/HSP90-like ATPase; Adenylyl cyclase... 0.04 OrthoFinder
XM_003062956.1 MicpuC2_21996, 21996 Signal transduction histidine kinase,... 0.03 OrthoFinder
XM_003064490.1 MicpuC2_10373, 10373 Signal transduction response regulator, receiver domain;... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004806 triglyceride lipase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015740 C4-dicarboxylate transport IEP Enrichment
BP GO:0015743 malate transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 2192 2304
IPR000014 PAS 1217 1313
IPR000014 PAS 1333 1438
IPR000014 PAS 1036 1128
IPR003594 HATPase_C 1576 1728
IPR005635 Inner_centromere_prot_ARK-bd 946 997
IPR003661 HisK_dim/P 1463 1526
No external refs found!