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Aliases : PRW59191
Description : Tetratricopeptide repeat 27-like protein
Gene families : OG_01_0003778 (OrthoFinder) Phylogenetic Tree(s): OG0003778_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|LHPG02000004.1_cds_PRW59191.1_6885 | |
| Cluster | HCCA: Cluster_45 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000448.24 | tig00000448_g856.t1 | No description available | 0.04 | OrthoFinder | |
| Cz02g20200.t1 | No alias | Tetratricopeptide repeat [Interproscan]. | 0.05 | OrthoFinder | |
| EOD28196 | No alias | Hypothetical protein [Ensembl]. | 0.03 | OrthoFinder | |
| EOD28197 | No alias | Hypothetical protein [Ensembl]. | 0.05 | OrthoFinder | |
| OT_10G01870.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| Sro1389_g268550.1 | Contig3774.g28975 | Repeat protein 27 | 0.04 | OrthoFinder | |
| XM_002503460.1 | MICPUN_101373, 101373 | Hypothetical protein | 0.05 | OrthoFinder | |
| XM_003055583.1 | MicpuC2_50485, 50485 | Hypothetical protein | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Enrichment |
| CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Enrichment |
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Enrichment |
| BP | GO:0001510 | RNA methylation | IEP | Enrichment |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Enrichment |
| MF | GO:0004107 | chorismate synthase activity | IEP | Enrichment |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | Enrichment |
| MF | GO:0005319 | lipid transporter activity | IEP | Enrichment |
| MF | GO:0005384 | manganese ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| MF | GO:0005542 | folic acid binding | IEP | Enrichment |
| CC | GO:0005680 | anaphase-promoting complex | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006400 | tRNA modification | IEP | Enrichment |
| BP | GO:0006473 | protein acetylation | IEP | Enrichment |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0006869 | lipid transport | IEP | Enrichment |
| BP | GO:0006873 | cellular ion homeostasis | IEP | Enrichment |
| BP | GO:0006875 | cellular metal ion homeostasis | IEP | Enrichment |
| BP | GO:0007346 | regulation of mitotic cell cycle | IEP | Enrichment |
| BP | GO:0008033 | tRNA processing | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Enrichment |
| BP | GO:0009451 | RNA modification | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0010965 | regulation of mitotic sister chromatid separation | IEP | Enrichment |
| BP | GO:0016043 | cellular component organization | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016426 | tRNA (adenine) methyltransferase activity | IEP | Enrichment |
| MF | GO:0016429 | tRNA (adenine-N1-)-methyltransferase activity | IEP | Enrichment |
| BP | GO:0016573 | histone acetylation | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | Enrichment |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Enrichment |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Enrichment |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
| BP | GO:0030003 | cellular cation homeostasis | IEP | Enrichment |
| BP | GO:0030026 | cellular manganese ion homeostasis | IEP | Enrichment |
| BP | GO:0030071 | regulation of mitotic metaphase/anaphase transition | IEP | Enrichment |
| BP | GO:0030488 | tRNA methylation | IEP | Enrichment |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | Enrichment |
| MF | GO:0030515 | snoRNA binding | IEP | Enrichment |
| CC | GO:0030688 | preribosome, small subunit precursor | IEP | Enrichment |
| MF | GO:0031406 | carboxylic acid binding | IEP | Enrichment |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Enrichment |
| CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | Enrichment |
| BP | GO:0032259 | methylation | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| BP | GO:0033043 | regulation of organelle organization | IEP | Enrichment |
| BP | GO:0033044 | regulation of chromosome organization | IEP | Enrichment |
| BP | GO:0033045 | regulation of sister chromatid segregation | IEP | Enrichment |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| CC | GO:0034708 | methyltransferase complex | IEP | Enrichment |
| BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| MF | GO:0043177 | organic acid binding | IEP | Enrichment |
| BP | GO:0043412 | macromolecule modification | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| CC | GO:0043527 | tRNA methyltransferase complex | IEP | Enrichment |
| BP | GO:0043543 | protein acylation | IEP | Enrichment |
| BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0046916 | cellular transition metal ion homeostasis | IEP | Enrichment |
| MF | GO:0046983 | protein dimerization activity | IEP | Enrichment |
| BP | GO:0048878 | chemical homeostasis | IEP | Enrichment |
| BP | GO:0050801 | ion homeostasis | IEP | Enrichment |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Enrichment |
| BP | GO:0051983 | regulation of chromosome segregation | IEP | Enrichment |
| BP | GO:0055065 | metal ion homeostasis | IEP | Enrichment |
| BP | GO:0055071 | manganese ion homeostasis | IEP | Enrichment |
| BP | GO:0055076 | transition metal ion homeostasis | IEP | Enrichment |
| BP | GO:0055080 | cation homeostasis | IEP | Enrichment |
| BP | GO:0055082 | cellular chemical homeostasis | IEP | Enrichment |
| BP | GO:0061024 | membrane organization | IEP | Enrichment |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| MF | GO:0072341 | modified amino acid binding | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | Enrichment |
| BP | GO:0120009 | intermembrane lipid transfer | IEP | Enrichment |
| MF | GO:0120013 | lipid transfer activity | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901990 | regulation of mitotic cell cycle phase transition | IEP | Enrichment |
| BP | GO:1902099 | regulation of metaphase/anaphase transition of cell cycle | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| BP | GO:1905818 | regulation of chromosome separation | IEP | Enrichment |
| CC | GO:1990234 | transferase complex | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |