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  5. lcl|LHPG02000004.1_cds_PRW59025.1_7499

lcl|LHPG02000004.1_cds_PRW59025.1_7499 (PRW59025)


Aliases : PRW59025

Description : Hcp1 family type VI secretion system effector


Gene families : OG_01_0005023 (OrthoFinder) Phylogenetic Tree(s): OG0005023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000004.1_cds_PRW59025.1_7499
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1.679 1.679 Type VI secretion system effector Hcp; ImpA, N-terminal;... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR008514 T6SS_Hcp 13 112
No external refs found!