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Aliases : PRW58990
Description : Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1
Gene families : OG_01_0000609 (OrthoFinder) Phylogenetic Tree(s): OG0000609_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|LHPG02000004.1_cds_PRW58990.1_7232 | |
| Cluster | HCCA: Cluster_61 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000178.74 | tig00000178_g12790.t1 | No description available | 0.02 | OrthoFinder | |
| Cz01g21150.t1 | No alias | FCP1 homology domain [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0212s00004.1 | 33202580 | FCP1 homology domain [Interproscan]. | 0.03 | OrthoFinder | |
| Sro1582_g283810.1 | Contig2540.g20708 | Carboxy-terminal domain RNA polymerase II polypeptide A... | 0.01 | OrthoFinder | |
| TP01G05550.1 | No alias | FCP1 homology domain [Interproscan]. | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Enrichment |
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Enrichment |
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Enrichment |
| MF | GO:0003684 | damaged DNA binding | IEP | Enrichment |
| MF | GO:0003729 | mRNA binding | IEP | Enrichment |
| MF | GO:0003756 | protein disulfide isomerase activity | IEP | Enrichment |
| MF | GO:0003909 | DNA ligase activity | IEP | Enrichment |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Enrichment |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Enrichment |
| MF | GO:0004806 | triglyceride lipase activity | IEP | Enrichment |
| CC | GO:0005643 | nuclear pore | IEP | Enrichment |
| CC | GO:0005685 | U1 snRNP | IEP | Enrichment |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Enrichment |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | Enrichment |
| BP | GO:0006077 | (1->6)-beta-D-glucan metabolic process | IEP | Enrichment |
| BP | GO:0006078 | (1->6)-beta-D-glucan biosynthetic process | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006281 | DNA repair | IEP | Enrichment |
| BP | GO:0006284 | base-excision repair | IEP | Enrichment |
| BP | GO:0006310 | DNA recombination | IEP | Enrichment |
| BP | GO:0006376 | mRNA splice site selection | IEP | Enrichment |
| BP | GO:0006950 | response to stress | IEP | Enrichment |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
| MF | GO:0008252 | nucleotidase activity | IEP | Enrichment |
| MF | GO:0008253 | 5'-nucleotidase activity | IEP | Enrichment |
| BP | GO:0009166 | nucleotide catabolic process | IEP | Enrichment |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Enrichment |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009264 | deoxyribonucleotide catabolic process | IEP | Enrichment |
| MF | GO:0016298 | lipase activity | IEP | Enrichment |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Enrichment |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Enrichment |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Enrichment |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Enrichment |
| MF | GO:0016791 | phosphatase activity | IEP | Enrichment |
| MF | GO:0016864 | intramolecular oxidoreductase activity, transposing S-S bonds | IEP | Enrichment |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Enrichment |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Enrichment |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Enrichment |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Enrichment |
| CC | GO:0030880 | RNA polymerase complex | IEP | Enrichment |
| BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Enrichment |
| BP | GO:0034404 | nucleobase-containing small molecule biosynthetic process | IEP | Enrichment |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Enrichment |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Enrichment |
| BP | GO:0044042 | glucan metabolic process | IEP | Enrichment |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Enrichment |
| BP | GO:0050896 | response to stimulus | IEP | Enrichment |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | Enrichment |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Enrichment |
| BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Enrichment |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Enrichment |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Enrichment |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Enrichment |
| MF | GO:0140299 | small molecule sensor activity | IEP | Enrichment |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Enrichment |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Enrichment |
| BP | GO:1901292 | nucleoside phosphate catabolic process | IEP | Enrichment |
| No external refs found! |