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  5. lcl|LHPG02000004.1_cds_PRW58872.1_6881

lcl|LHPG02000004.1_cds_PRW58872.1_6881 (PRW58872)


Aliases : PRW58872

Description : Mechanosensitive ion channel 10


Gene families : OG_01_0000453 (OrthoFinder) Phylogenetic Tree(s): OG0000453_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000004.1_cds_PRW58872.1_6881
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
PTI_30G00430.1 No alias Mechanosensitive ion channel MscS [Interproscan]. 0.02 OrthoFinder
Sro384_g131400.1 Contig425.g5713 Mechanosensitive ion channel MscS [Interproscan]. 0.02 OrthoFinder
Sro667_g184230.1 Contig793.g8884 Mechanosensitive ion channel MscS [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Enrichment
MF GO:0005375 copper ion transmembrane transporter activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006825 copper ion transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006906 vesicle fusion IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007030 Golgi organization IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016050 vesicle organization IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
BP GO:0035434 copper ion transmembrane transport IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Enrichment
BP GO:0048284 organelle fusion IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0061025 membrane fusion IEP Enrichment
BP GO:0090174 organelle membrane fusion IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR006685 MscS_channel 1034 1168
No external refs found!