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  5. lcl|LHPG02000003.1_cds_PRW59991.1_6273

lcl|LHPG02000003.1_cds_PRW59991.1_6273 (PRW59991)


Aliases : PRW59991

Description : RNA-binding Nova-2-like isoform X1


Gene families : OG_01_0000189 (OrthoFinder) Phylogenetic Tree(s): OG0000189_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000003.1_cds_PRW59991.1_6273
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
PTI_23G02020.1 No alias K Homology domain, type 1 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56884 56884 K Homology domain, type 1 [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01001206.1_cds_GFH17824.1_12301 HaLaN_14532, GFH17824 K Homology domain, type 1 [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01002302.1_cds_GFH23567.1_18044 HaLaN_21195, GFH23567 WW domain-containing protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003997 acyl-CoA oxidase activity IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006635 fatty acid beta-oxidation IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009062 fatty acid catabolic process IEP Enrichment
BP GO:0010921 regulation of phosphatase activity IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0019220 regulation of phosphate metabolic process IEP Enrichment
BP GO:0019395 fatty acid oxidation IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0019902 phosphatase binding IEP Enrichment
MF GO:0019903 protein phosphatase binding IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0031399 regulation of protein modification process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0034440 lipid oxidation IEP Enrichment
BP GO:0035303 regulation of dephosphorylation IEP Enrichment
BP GO:0035304 regulation of protein dephosphorylation IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Enrichment
BP GO:0044242 cellular lipid catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0051174 regulation of phosphorus metabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051336 regulation of hydrolase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
BP GO:0072329 monocarboxylic acid catabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 147 210
IPR004088 KH_dom_type_1 294 360
IPR004088 KH_dom_type_1 56 124
No external refs found!