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  5. lcl|LHPG02000003.1_cds_PRW59737.1_6611

lcl|LHPG02000003.1_cds_PRW59737.1_6611 (PRW59737)


Aliases : PRW59737

Description : CTR type copper ion transporter


Gene families : OG_01_0002275 (OrthoFinder) Phylogenetic Tree(s): OG0002275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000003.1_cds_PRW59737.1_6611
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_89319 89319 Hypothetical protein 0.02 OrthoFinder
Vocar.0014s0113.1 32888596 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005375 copper ion transmembrane transporter activity IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0035434 copper ion transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006906 vesicle fusion IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007030 Golgi organization IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
BP GO:0016050 vesicle organization IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048280 vesicle fusion with Golgi apparatus IEP Enrichment
BP GO:0048284 organelle fusion IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0061025 membrane fusion IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0090174 organelle membrane fusion IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR007274 Cop_transporter 232 432
No external refs found!