lcl|LHPG02000002.1_cds_PRW60709.1_4396 (PRW60709)


Aliases : PRW60709

Description : TRNA pseudouridine synthase mitochondrial-like


Gene families : OG_01_0001270 (OrthoFinder) Phylogenetic Tree(s): OG0001270_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000002.1_cds_PRW60709.1_4396
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_60339 60339 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
CC GO:0030014 CCR4-NOT complex IEP Enrichment
BP GO:0032958 inositol phosphate biosynthetic process IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR020097 PsdUridine_synth_TruA_a/b_dom 561 667
IPR009009 RlpA-like_DPBB 54 106
No external refs found!