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  5. lcl|LHPG02000002.1_cds_PRW60239.1_4741

lcl|LHPG02000002.1_cds_PRW60239.1_4741 (PRW60239)


Aliases : PRW60239

Description : Zinc finger domain-containing MYND finger domain


Gene families : OG_01_0000408 (OrthoFinder) Phylogenetic Tree(s): OG0000408_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000002.1_cds_PRW60239.1_4741
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
lcl|LHPG02000002.1_cds_PRW60852.1_4380 PRW60852 Ocs element-binding factor 1-like 0.03 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57566.1_8541 PRW57566 Zinc finger, MYND-type [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
MF GO:0016805 dipeptidase activity IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016843 amine-lyase activity IEP Enrichment
MF GO:0016844 strictosidine synthase activity IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR002893 Znf_MYND 356 386
No external refs found!