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  5. lcl|LHPG02000002.1_cds_PRW60237.1_4593

lcl|LHPG02000002.1_cds_PRW60237.1_4593 (PRW60237)


Aliases : PRW60237

Description : Serine-glyoxylate aminotransferase isoform B


Gene families : OG_01_0001628 (OrthoFinder) Phylogenetic Tree(s): OG0001628_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000002.1_cds_PRW60237.1_4593
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000178.29 tig00000178_g12738.t1 Amino acid metabolism.biosynthesis.aspartate... 0.08 OrthoFinder
Cre01.g005150 30788515, SGA1 Amino acid metabolism.biosynthesis.aspartate... 0.13 OrthoFinder
Cz11g17130.t1 No alias Aminotransferase class V domain [Interproscan]. 0.15 OrthoFinder
Dusal.0413s00001.1 33191123 Aminotransferase class V domain [Interproscan]. 0.05 OrthoFinder
Dusal.1263s00001.1 33196893 Aminotransferase class V domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_54147 54147 Aminotransferase class V domain [Interproscan]. 0.05 OrthoFinder
Vocar.0001s0284.1 32885778 Aminotransferase class V domain [Interproscan]. 0.07 OrthoFinder
Vocar.0024s0165.1 32890467 Aminotransferase class V domain [Interproscan]. 0.06 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60236.1_4592 PRW60236 Serine-glyoxylate aminotransferase isoform A 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004143 diacylglycerol kinase activity IEP Enrichment
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005672 transcription factor TFIIA complex IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006544 glycine metabolic process IEP Enrichment
BP GO:0006546 glycine catabolic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009071 serine family amino acid catabolic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR000192 Aminotrans_V_dom 78 369
No external refs found!