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  5. lcl|LHPG02000001.1_cds_PRW61487.1_652

lcl|LHPG02000001.1_cds_PRW61487.1_652 (PRW61487)


Aliases : PRW61487

Description : CPD photolyase isoform B


Gene families : OG_01_0000241 (OrthoFinder) Phylogenetic Tree(s): OG0000241_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000001.1_cds_PRW61487.1_652
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020952.44 tig00020952_g16502.t1 DNA damage response.DNA repair... 0.01 OrthoFinder
XM_002507137.1 MICPUN_55168, 55168 Transcription factor IIS, N-terminal; DNA photolyase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR006050 DNA_photolyase_N 425 586
IPR000719 Prot_kinase_dom 50 335
No external refs found!