1. Home
  2. Species
  3. Chlorella sorokiniana
  4. Sequence
  5. lcl|LHPG02000001.1_cds_PRW61441.1_421

lcl|LHPG02000001.1_cds_PRW61441.1_421 (PRW61441)


Aliases : PRW61441

Description : Eukaryotic translation initiation factor 4G


Gene families : OG_01_0000648 (OrthoFinder) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000001.1_cds_PRW61441.1_421
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021350.5 tig00021350_g20623.t1 Eukaryotic translation initiation factor 4G OS=Triticum aestivum 0.03 OrthoFinder
Cre12.g529950 30792112, EIF4G Eukaryotic translation initiation factor isoform 4G-2... 0.04 OrthoFinder
Cre17.g696250 30782553 Eukaryotic translation initiation factor 4G OS=Triticum aestivum 0.04 OrthoFinder
Cz03g26140.t1 No alias MIF4G-like, type 3 [Interproscan]. 0.03 OrthoFinder
Cz05g11140.t1 No alias Initiation factor eIF-4 gamma, MA3; Protein of unknown... 0.06 OrthoFinder
Dusal.0098s00032.1 33203617 MIF4G-like, type 3; Initiation factor eIF-4 gamma, MA3... 0.03 OrthoFinder
Dusal.1520s00001.1 33200623 MIF4G-like, type 3 [Interproscan]. 0.03 OrthoFinder
Dusal.2136s00001.1 33198564 Initiation factor eIF-4 gamma, MA3 [Interproscan]. 0.03 OrthoFinder
OT_03G00780.1 No alias MIF4G-like, type 3 [Interproscan]. 0.02 OrthoFinder
Sro109_g054460.1 Contig4753.g35228 Factor 4 gamma 2 0.16 OrthoFinder
Transcript_contig_78111 78111 Initiation factor eIF-4 gamma, MA3; MIF4G-like, type 3... 0.03 OrthoFinder
Vocar.0006s0434.1 32894161 MIF4G-like, type 3; Initiation factor eIF-4 gamma, MA3... 0.03 OrthoFinder
XM_002500860.1 MICPUN_71782, 71782 MIF4G-like, type 3 [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000298.1_cds_GFH10238.1_4715 HaLaN_05516, GFH10238 MI domain-containing protein 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499161.1_8114 KAA8499161 Eukaryotic translation initiation factor 4 gamma 1 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005542 folic acid binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0007346 regulation of mitotic cell cycle IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0030688 preribosome, small subunit precursor IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033044 regulation of chromosome organization IEP Enrichment
BP GO:0033045 regulation of sister chromatid segregation IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042274 ribosomal small subunit biogenesis IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051983 regulation of chromosome segregation IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0072341 modified amino acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0120013 lipid transfer activity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Enrichment
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Enrichment
BP GO:1905818 regulation of chromosome separation IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR003890 MIF4G-like_typ-3 971 1268
IPR003891 Initiation_fac_eIF4g_MI 1420 1529
No external refs found!