Aliases : PRW60934
Description : ATP-dependent zinc metalloprotease chloroplastic isoform C
Gene families : OG_01_0000075 (OrthoFinder) Phylogenetic Tree(s): OG0000075_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|LHPG02000001.1_cds_PRW60934.1_745 | |
Cluster | HCCA: Cluster_69 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00021179.74 | tig00021179_g19288.t1 | ATP-dependent zinc metalloprotease FTSH 1, chloroplastic... | 0.02 | OrthoFinder | |
Cre07.g352350 | 30774541 | ATP-dependent zinc metalloprotease FTSH, chloroplastic... | 0.03 | OrthoFinder | |
Cz05g27050.t1 | No alias | AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... | 0.02 | OrthoFinder | |
Cz13g18040.t1 | No alias | AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... | 0.02 | OrthoFinder | |
EOD15728 | No alias | ATP-dependent metalloprotease FtsH [Ensembl]. | 0.02 | OrthoFinder | |
OT_08G02770.1 | No alias | Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... | 0.02 | OrthoFinder | |
OT_09G02830.1 | No alias | Peptidase M41 [Interproscan]. | 0.02 | OrthoFinder | |
OT_10G01100.1 | No alias | Peptidase M41; AAA ATPase, AAA+ lid domain; ATPase,... | 0.02 | OrthoFinder | |
OT_11G02060.1 | No alias | AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... | 0.03 | OrthoFinder | |
Sro1141_g245690.1 | Contig1502.g13746 | Zinc metalloprotease FTSH, chloroplastic | 0.02 | OrthoFinder | |
Sro21_g014710.1 | Contig813.g9061 | Zinc metalloprotease FTSH, chloroplastic | 0.02 | OrthoFinder | |
Transcript_contig_54241 | 54241 | Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... | 0.02 | OrthoFinder | |
Vocar.0004s0172.1 | 32889955 | Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... | 0.03 | OrthoFinder | |
Vocar.0005s0095.1 | 32884072 | Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... | 0.03 | OrthoFinder | |
Vocar.0028s0163.1 | 32895585 | ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... | 0.02 | OrthoFinder | |
XM_002508006.1 | MICPUN_94954, 94954 | Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... | 0.02 | OrthoFinder | |
XM_002508675.1 | MICPUN_95257, 95257 | AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... | 0.03 | OrthoFinder | |
XM_003058612.1 | MicpuC2_58438, 58438 | ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... | 0.02 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8499595.1_8548 | KAA8499595 | ATP-dependent zinc metalloprotease FtsH 3 | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004222 | metalloendopeptidase activity | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
BP | GO:0006508 | proteolysis | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003724 | RNA helicase activity | IEP | Enrichment |
MF | GO:0003951 | NAD+ kinase activity | IEP | Enrichment |
CC | GO:0005634 | nucleus | IEP | Enrichment |
BP | GO:0005984 | disaccharide metabolic process | IEP | Enrichment |
BP | GO:0005991 | trehalose metabolic process | IEP | Enrichment |
BP | GO:0005992 | trehalose biosynthetic process | IEP | Enrichment |
BP | GO:0006739 | NADP metabolic process | IEP | Enrichment |
BP | GO:0006741 | NADP biosynthetic process | IEP | Enrichment |
BP | GO:0006743 | ubiquinone metabolic process | IEP | Enrichment |
BP | GO:0006744 | ubiquinone biosynthetic process | IEP | Enrichment |
BP | GO:0008104 | protein localization | IEP | Enrichment |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | Enrichment |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Enrichment |
BP | GO:0015031 | protein transport | IEP | Enrichment |
BP | GO:0017038 | protein import | IEP | Enrichment |
BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | Enrichment |
BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | Enrichment |
BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | Enrichment |
BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Enrichment |
BP | GO:0042180 | cellular ketone metabolic process | IEP | Enrichment |
BP | GO:0042181 | ketone biosynthetic process | IEP | Enrichment |
BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | Enrichment |
BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | Enrichment |
BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Enrichment |
BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:1901661 | quinone metabolic process | IEP | Enrichment |
BP | GO:1901663 | quinone biosynthetic process | IEP | Enrichment |
No external refs found! |