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  5. Cre17.g731050

Cre17.g731050 (30782523)


Aliases : 30782523

Description : ABC transporter I family member 20 OS=Arabidopsis thaliana


Gene families : OG_01_0001307 (OrthoFinder) Phylogenetic Tree(s): OG0001307_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g731050
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cz04g21110.t1 No alias ABC transporter-like [Interproscan]. 0.15 OrthoFinder
Cz08g22150.t1 No alias ABC transporter-like [Interproscan]. 0.13 OrthoFinder
EOD32422 No alias ABC transporter-like [Interproscan]. 0.07 OrthoFinder
OT_01G01310.1 No alias ABC transporter-like [Interproscan]. 0.07 OrthoFinder
OT_09G00130.1 No alias ABC transporter-like [Interproscan]. 0.09 OrthoFinder
PTI_02G01230.1 No alias ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Sro2866_g338940.1 Contig1002.g10101 (ABC) transporter 0.03 OrthoFinder
Sro555_g165600.1 Contig677.g7908 Uncharacterized ABC transporter ATP-binding protein C20G4.01 0.03 OrthoFinder
TP08G03370.1 No alias ABC transporter-like [Interproscan]. 0.03 OrthoFinder
Transcript_contig_4264 4264 ABC transporter-like [Interproscan]. 0.04 OrthoFinder
Vocar.0009s0036.1 32893484 ABC transporter-like [Interproscan]. 0.05 OrthoFinder
XM_002504365.1 MICPUN_85209, 85209 ABC transporter-like [Interproscan]. 0.04 OrthoFinder
XM_002506008.1 MICPUN_109515, 109515 ABC transporter-like [Interproscan]. 0.07 OrthoFinder
lcl|BLLF01000320.1_cds_GFH10491.1_4968 HaLaN_05813, GFH10491 ABC transporter domain-containing protein 0.1 OrthoFinder
lcl|BLLF01000494.1_cds_GFH12356.1_6833 HaLaN_08024, GFH12356 ABC transporter domain-containing protein 0.09 OrthoFinder
lcl|LHPG02000023.1_cds_PRW20596.1_5502 PRW20596 ABC transporter I family member 20 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004359 glutaminase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042816 vitamin B6 metabolic process IEP Enrichment
BP GO:0042819 vitamin B6 biosynthetic process IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 106 252
No external refs found!