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  5. Cre17.g729800

Cre17.g729800 (30781893)


Aliases : 30781893

Description : Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component


Gene families : OG_01_0001006 (OrthoFinder) Phylogenetic Tree(s): OG0001006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g729800
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Dusal.0584s00003.1 33200149 Membrane insertase YidC/ALB3/OXA1/COX18 [Interproscan]. 0.02 OrthoFinder
Sro461_g147740.1 Contig3552.g27428 Membrane protein insertase YidC 0.02 OrthoFinder
Vocar.0004s0298.1 32889719 Membrane insertase YidC/ALB3/OXA1/COX18 [Interproscan]. 0.02 OrthoFinder
XM_002501658.1 MICPUN_96326, 96326 Cytochrome oxidase biogenesis family (ALB3.1) 0.03 OrthoFinder
XM_003062590.1 MicpuC2_52221, 52221 Cytochrome oxidase biogenesis family (ALB3.1) 0.02 OrthoFinder
lcl|BLLF01000067.1_cds_GFH06986.1_1463 HaLaN_01717, GFH06986 Membrane insertase YidC/ALB3/OXA1/COX18 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000322.1_cds_GFH10511.1_4988 HaLaN_05837, GFH10511 Membrane insertase YidC/ALB3/OXA1/COX18 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01003792.1_cds_GFH28235.1_22712 HaLaN_26692, GFH28235 Membrane insertase YidC/ALB3/OXA1/COX18 [Interproscan]. 0.07 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39359.1_2598 PRW39359 ALBINO3 chloroplastic isoform A 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
InterPro domains Description Start Stop
IPR001708 YidC/ALB3/OXA1/COX18 101 309
No external refs found!