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  5. Cre17.g727600

Cre17.g727600 (30782771)


Aliases : 30782771

No description available


Gene families : OG_01_0000454 (OrthoFinder) Phylogenetic Tree(s): OG0000454_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g727600
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Cz02g19210.t1 No alias VPS13, repeated coiled region; Vacuolar protein... 0.03 OrthoFinder
Cz14g16120.t1 No alias Vacuolar protein sorting-associated protein 13,... 0.02 OrthoFinder
Dusal.0595s00012.1 33191197 Vacuolar protein sorting-associated protein 13,... 0.03 OrthoFinder
OT_03G05120.1 No alias Vacuolar protein sorting-associated protein 13,... 0.02 OrthoFinder
Transcript_contig_79412 79412 Vacuolar protein sorting-associated protein 13,... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR026854 VPS13-like_N 2 114
IPR031645 VPS13_C 6839 7027
IPR009543 SHR-BD 6111 6259
No external refs found!