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  5. Cre17.g725150

Cre17.g725150 (30782210)


Aliases : 30782210

Description : ABC transporter B family member 7 OS=Arabidopsis thaliana


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g725150
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000741.4 tig00000741_g3824.t1 ABC transporter B family member 21 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00020952.7 tig00020952_g16473.t1 ABC transporter B family member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder
PTI_03G01030.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
PTI_13G02060.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Sro1234_g254930.1 Contig2459.g20128 Probable microcin-H47 secretion/processing ATP-binding... 0.03 OrthoFinder
Sro157_g071300.1 Contig2362.g19420 Lactococcin transport/processing ATP-binding protein LcnC-like 0.02 OrthoFinder
Sro1916_g305200.1 Contig4310.g32500 Transporter B family member 0.02 OrthoFinder
TP03G09080.1 No alias ABC transporter-like; ABC transporter type 1,... 0.03 OrthoFinder
XM_002505595.1 MICPUN_87670, 87670 ATP-binding cassette superfamily 0.04 OrthoFinder
lcl|BLLF01000498.1_cds_GFH12386.1_6863 HaLaN_08063, GFH12386 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002502.1_cds_GFH24318.1_18795 HaLaN_22091, GFH24318 ATP-binding cassette transporter 0.01 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494946.1_3476 KAA8494946 Multidrug resistance protein 1B 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 856 1128
IPR011527 ABC1_TM_dom 64 334
IPR003439 ABC_transporter-like_ATP-bd 455 603
IPR003439 ABC_transporter-like_ATP-bd 1199 1347
No external refs found!