Cre17.g721700 (30782709, CPLD44)

Aliases : 30782709, CPLD44

Description : Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana

Gene families : OG_01_0000975 (OrthoFinder) Phylogenetic Tree(s): OG0000975_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Cre17.g721700
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001628.6 tig00001628_g9433.t1 No description available 0.03 OrthoFinder
Cz06g31120.t1 No alias Hypothetical protein 0.06 OrthoFinder
Cz06g31130.t1 No alias Pentapeptide repeat [Interproscan]. 0.05 OrthoFinder
PTI_05G00870.1 No alias Hypothetical protein 0.01 OrthoFinder
Transcript_contig_54693 54693 Pentapeptide repeat [Interproscan]. 0.01 OrthoFinder
XM_002505560.1 MICPUN_54755, 54755 Pentapeptide repeat [Interproscan]. 0.02 OrthoFinder
XM_003062880.1 MicpuC2_21938, 21938 Pentapeptide repeat [Interproscan]. 0.03 OrthoFinder
XM_003063673.1 MicpuC2_65966, 65966 Pentapeptide repeat [Interproscan]. 0.06 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59735.1_6429 PRW59735 Thylakoid lumenal chloroplastic 0.08 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492529.1_9222 KAA8492529 Thylakoid lumenal 15 kDa protein 1, chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 139 174
IPR001646 5peptide_repeat 97 133
No external refs found!