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  5. Cre17.g721700

Cre17.g721700 (30782709, CPLD44)


Aliases : 30782709, CPLD44

Description : Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0000975 (OrthoFinder) Phylogenetic Tree(s): OG0000975_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g721700
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001628.6 tig00001628_g9433.t1 No description available 0.03 OrthoFinder
Cz06g31120.t1 No alias Hypothetical protein 0.06 OrthoFinder
Cz06g31130.t1 No alias Pentapeptide repeat [Interproscan]. 0.05 OrthoFinder
PTI_05G00870.1 No alias Hypothetical protein 0.01 OrthoFinder
Transcript_contig_54693 54693 Pentapeptide repeat [Interproscan]. 0.01 OrthoFinder
XM_002505560.1 MICPUN_54755, 54755 Pentapeptide repeat [Interproscan]. 0.02 OrthoFinder
XM_003062880.1 MicpuC2_21938, 21938 Pentapeptide repeat [Interproscan]. 0.03 OrthoFinder
XM_003063673.1 MicpuC2_65966, 65966 Pentapeptide repeat [Interproscan]. 0.06 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59735.1_6429 PRW59735 Thylakoid lumenal chloroplastic 0.08 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492529.1_9222 KAA8492529 Thylakoid lumenal 15 kDa protein 1, chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 139 174
IPR001646 5peptide_repeat 97 133
No external refs found!