1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre17.g721500

Cre17.g721500 (30782074)


Aliases : 30782074

Description : Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.granule-bound starch (amylose) synthase


Gene families : OG_01_0000262 (OrthoFinder) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g721500
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000135.1 tig00000135_g7967.t1 Granule-bound starch synthase 1,... 0.02 OrthoFinder
Cz12g15250.t1 No alias Starch synthase, catalytic domain; Glycosyl transferase,... 0.02 OrthoFinder
SymbC1.scaffold167.12 167.12 Glycosyl transferase, family 1; Starch synthase,... 0.02 OrthoFinder
Vocar.0001s1467.1 32885239 Glycosyl transferase, family 1; Starch synthase,... 0.08 OrthoFinder
Vocar.0015s0224.1 32898942 Glycosyl transferase, family 1; Starch synthase,... 0.03 OrthoFinder
Vocar.0025s0172.1 32898226 Starch synthase, catalytic domain [Interproscan]. 0.03 OrthoFinder
XM_002500243.1 MICPUN_104736, 104736 Glycosyltransferase family 5 protein (GBSSI) 0.02 OrthoFinder
lcl|BLLF01000949.1_cds_GFH16119.1_10596 HaLaN_12479, GFH16119 Starch synthase, chloroplastic/amyloplastic 0.06 OrthoFinder
lcl|BLLF01002208.1_cds_GFH23175.1_17652 HaLaN_20748, GFH23175 Glyco_transf_5 domain-containing protein 0.04 OrthoFinder
lcl|BLLF01004140.1_cds_GFH29014.1_23491 HaLaN_27598, GFH29014 Starch synthase, chloroplastic/amyloplastic 0.05 OrthoFinder
lcl|BLLF01005074.1_cds_GFH30695.1_25172 HaLaN_29591, GFH30695 Starch synthase, chloroplastic/amyloplastic 0.03 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59930.1_6319 PRW59930 Granule-bound starch synthase chloroplastic amyloplastic-like 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499521.1_8474 KAA8499521 Granule-bound starch synthase 1, chloroplastic/amyloplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005347 ATP transmembrane transporter activity IEP Enrichment
MF GO:0005471 ATP:ADP antiporter activity IEP Enrichment
BP GO:0006862 nucleotide transport IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015217 ADP transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015301 anion:anion antiporter activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0140323 solute:anion antiporter activity IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 396 536
IPR013534 Starch_synth_cat_dom 79 343
No external refs found!