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  5. Cre17.g715750

Cre17.g715750 (30782499, SEC13)


Aliases : 30782499, SEC13

Description : Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec13 scaffolding component


Gene families : OG_01_0000807 (OrthoFinder) Phylogenetic Tree(s): OG0000807_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre17.g715750
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Cz03g29070.t1 No alias WD40 repeat [Interproscan]. 0.05 OrthoFinder
Dusal.0081s00032.1 33198240 WD40 repeat [Interproscan]. 0.02 OrthoFinder
EOD21885 No alias Secretory protein 13 [Ensembl]. 0.04 OrthoFinder
EOD35044 No alias WD40 repeat [Interproscan]. 0.01 OrthoFinder
OT_11G03310.1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
PTI_05G01310.1 No alias WD40 repeat [Interproscan]. 0.01 OrthoFinder
Sro702_g189930.1 Contig1416.g12996 Transport protein SEC13 0.02 OrthoFinder
TP15G00140.1 No alias WD40 repeat [Interproscan]. 0.03 OrthoFinder
XM_002509120.1 MICPUN_95648, 95648 WD40 repeat [Interproscan]. 0.03 OrthoFinder
XM_003061805.1 MicpuC2_48340, 48340 WD40 repeat [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499989.1_8942 KAA8499989 Nucleoporin seh1-A 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 8 39
IPR001680 WD40_repeat 48 85
No external refs found!