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  5. Cre16.g692300

Cre16.g692300 (30777566)


Aliases : 30777566

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g692300
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021434.18 tig00021434_g21315.t1 ABC transporter B family member 14 OS=Arabidopsis thaliana 0.01 OrthoFinder
Dusal.1005s00005.1 33195266 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
EOD14122 No alias Putative ABC transporter [Ensembl]. 0.01 OrthoFinder
EOD26441 No alias Putative ABC transporter [Ensembl]. 0.03 OrthoFinder
PTI_03G01030.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Sro1769_g296490.1 Contig4211.g32039 Cyclolysin secretion/processing ATP-binding protein CyaB 0.03 OrthoFinder
Sro3104_g343850.1 Contig2425.g19841 Colicin V secretion/processing ATP-binding protein CvaB 0.01 OrthoFinder
TP01G02080.1 No alias ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
Transcript_contig_54412 54412 ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
XM_003057040.1 MicpuC2_1092, 1092 ATP-binding cassette superfamily 0.02 OrthoFinder
XM_003061682.1 MicpuC2_20532, 20532 ATP-binding cassette superfamily 0.02 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60050.1_6327 PRW60050 ATP-binding cassette sub-family B member 9 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 378 525
IPR011527 ABC1_TM_dom 49 313
No external refs found!