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Aliases : 30777670, RAA2
Description : Trans-splicing factor Raa2, chloroplastic OS=Chlamydomonas reinhardtii
Gene families : OG_01_0000746 (OrthoFinder) Phylogenetic Tree(s): OG0000746_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre16.g665750 | |
| Cluster | HCCA: Cluster_90 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Vocar.0009s0312.1 | 32893186 | tRNA pseudouridylate synthase B, C-terminal;... | 0.02 | OrthoFinder | |
| lcl|VRMN01000011.1_cds_KAA8491931.1_4939 | KAA8491931 | TRNA pseudouridine synthase B | 0.01 | OrthoFinder | |
| lcl|VRMN01000011.1_cds_KAA8491934.1_4942 | KAA8491934 | Putative tRNA pseudouridine synthase 1 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003993 | acid phosphatase activity | IEP | Enrichment |
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| BP | GO:0006811 | ion transport | IEP | Enrichment |
| MF | GO:0008131 | primary amine oxidase activity | IEP | Enrichment |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0008531 | riboflavin kinase activity | IEP | Enrichment |
| BP | GO:0009308 | amine metabolic process | IEP | Enrichment |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015293 | symporter activity | IEP | Enrichment |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Enrichment |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Enrichment |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015696 | ammonium transport | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Enrichment |
| MF | GO:0016641 | oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | IEP | Enrichment |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Enrichment |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Enrichment |
| MF | GO:0016791 | phosphatase activity | IEP | Enrichment |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| MF | GO:0048038 | quinone binding | IEP | Enrichment |
| MF | GO:0051213 | dioxygenase activity | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002501 | PsdUridine_synth_N | 80 | 167 |
| No external refs found! |