Cre16.g663900 (30777054)


Aliases : 30777054

Description : Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase


Gene families : OG_01_0001267 (OrthoFinder) Phylogenetic Tree(s): OG0001267_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre16.g663900
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.50 tig00000241_g20912.t1 Coenzyme metabolism.tetrapyrrol... 0.07 OrthoFinder
Cz03g22200.t1 No alias Porphobilinogen deaminase, C-terminal; Porphobilinogen... 0.21 OrthoFinder
Dusal.0145s00001.1 33195901 Porphobilinogen deaminase, N-terminal; Porphobilinogen... 0.04 OrthoFinder
EOD30502 No alias Porphobilinogen deaminase, N-terminal; Porphobilinogen... 0.05 OrthoFinder
OT_05G01260.1 No alias Porphobilinogen deaminase, N-terminal; Porphobilinogen... 0.1 OrthoFinder
PTI_06G02850.1 No alias Porphobilinogen deaminase, C-terminal; Porphobilinogen... 0.12 OrthoFinder
Sro10_g008400.1 Contig1.g64 Porphobilinogen deaminase 0.12 OrthoFinder
SymbC1.scaffold15.36 15.36 CoA-binding; Quinate/shikimate... 0.01 OrthoFinder
TP12G01000.1 No alias Porphobilinogen deaminase, C-terminal; Porphobilinogen... 0.11 OrthoFinder
Transcript_contig_56407 56407 Porphobilinogen deaminase, N-terminal; Porphobilinogen... 0.03 OrthoFinder
Vocar.0041s0034.1 32888740 Porphobilinogen deaminase, C-terminal; Porphobilinogen... 0.1 OrthoFinder
XM_002507518.1 MICPUN_78011, 78011 Hydroxymethylbilane synthase (HMBS) 0.04 OrthoFinder
XM_003056504.1 MicpuC2_31842, 31842 Porphobilinogen deaminase, chloroplast precursor (HEMC) 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW60963.1_596 PRW60963 Porphobilinogen deaminase 0.12 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004418 hydroxymethylbilane synthase activity IEA Interproscan
BP GO:0033014 tetrapyrrole biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008883 glutamyl-tRNA reductase activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR022418 Porphobilinogen_deaminase_C 268 339
IPR022417 Porphobilin_deaminase_N 43 251
No external refs found!