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  5. Cre14.g629300

Cre14.g629300 (30776608)


Aliases : 30776608

Description : Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease


Gene families : OG_01_0000131 (OrthoFinder) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre14.g629300
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000663.67 tig00000663_g3000.t1 Protein degradation.peptidase families.cysteine-type... 0.01 OrthoFinder
Cz07g25290.t1 No alias Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.02 OrthoFinder
Dusal.1057s00004.1 33195959 Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.02 OrthoFinder
Vocar.0050s0004.1 32892397 Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.03 OrthoFinder
lcl|BLLF01002839.1_cds_GFH25526.1_20003 HaLaN_23506, GFH25526 Ubiquitin carboxyl-terminal hydrolase 0.02 OrthoFinder
lcl|BLLF01003031.1_cds_GFH26127.1_20604 HaLaN_24225, GFH26127 Ubiquitin carboxyl-terminal hydrolase 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497844.1_6797 KAA8497844 Ubiquitin carboxyl-terminal hydrolase 23 0.05 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494033.1_3897 KAA8494033 Ubiquitin carboxyl-terminal hydrolase 10 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003724 RNA helicase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 102 416
No external refs found!