Cre13.g587500 (30784280)


Aliases : 30784280

Description : Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. japonica


Gene families : OG_01_0001828 (OrthoFinder) Phylogenetic Tree(s): OG0001828_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g587500
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001302.9 tig00001302_g8094.t1 No description available 0.05 OrthoFinder
Cpa|evm.model.tig00020734.51 tig00020734_g13603.t1 15-cis-phytoene desaturase, chloroplastic/chromoplastic... 0.09 OrthoFinder
Cz08g09110.t1 No alias Amine oxidase [Interproscan]. 0.06 OrthoFinder
Dusal.0372s00006.1 33200473 Amine oxidase [Interproscan]. 0.02 OrthoFinder
EOD13299 No alias NAD(P)-binding Rossmann-like domain [Interproscan]. 0.06 OrthoFinder
EOD18312 No alias NAD(P)-binding Rossmann-like domain [Interproscan]. 0.02 OrthoFinder
OT_03G04400.1 No alias Amine oxidase [Interproscan]. 0.05 OrthoFinder
PTI_03G03000.1 No alias Amine oxidase [Interproscan]. 0.04 OrthoFinder
PTI_21G02010.1 No alias Amine oxidase [Interproscan]. 0.04 OrthoFinder
Sro827_g207820.1 Contig2896.g23087 Inherit from COG: Desaturase 0.06 OrthoFinder
TP15G02480.1 No alias Amine oxidase [Interproscan]. 0.05 OrthoFinder
Transcript_contig_63477 63477 Amine oxidase [Interproscan]. 0.03 OrthoFinder
Vocar.0001s0004.1 32884377 Amine oxidase [Interproscan]. 0.05 OrthoFinder
Vocar.0004s0269.1 32889462 Amine oxidase [Interproscan]. 0.05 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18327.1_5810 PRW18327 Amine oxidase 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 96 551
No external refs found!