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Aliases : 30784280
Description : Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. japonica
Gene families : OG_01_0001828 (OrthoFinder) Phylogenetic Tree(s): OG0001828_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre13.g587500 | |
| Cluster | HCCA: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00001302.9 | tig00001302_g8094.t1 | No description available | 0.05 | OrthoFinder | |
| Cpa|evm.model.tig00020734.51 | tig00020734_g13603.t1 | 15-cis-phytoene desaturase, chloroplastic/chromoplastic... | 0.09 | OrthoFinder | |
| Cz08g09110.t1 | No alias | Amine oxidase [Interproscan]. | 0.06 | OrthoFinder | |
| Dusal.0372s00006.1 | 33200473 | Amine oxidase [Interproscan]. | 0.02 | OrthoFinder | |
| EOD13299 | No alias | NAD(P)-binding Rossmann-like domain [Interproscan]. | 0.06 | OrthoFinder | |
| EOD18312 | No alias | NAD(P)-binding Rossmann-like domain [Interproscan]. | 0.02 | OrthoFinder | |
| OT_03G04400.1 | No alias | Amine oxidase [Interproscan]. | 0.05 | OrthoFinder | |
| PTI_03G03000.1 | No alias | Amine oxidase [Interproscan]. | 0.04 | OrthoFinder | |
| PTI_21G02010.1 | No alias | Amine oxidase [Interproscan]. | 0.04 | OrthoFinder | |
| Sro827_g207820.1 | Contig2896.g23087 | Inherit from COG: Desaturase | 0.06 | OrthoFinder | |
| TP15G02480.1 | No alias | Amine oxidase [Interproscan]. | 0.05 | OrthoFinder | |
| Transcript_contig_63477 | 63477 | Amine oxidase [Interproscan]. | 0.03 | OrthoFinder | |
| Vocar.0001s0004.1 | 32884377 | Amine oxidase [Interproscan]. | 0.05 | OrthoFinder | |
| Vocar.0004s0269.1 | 32889462 | Amine oxidase [Interproscan]. | 0.05 | OrthoFinder | |
| lcl|LHPG02000026.1_cds_PRW18327.1_5810 | PRW18327 | Amine oxidase | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016491 | oxidoreductase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
| MF | GO:0004601 | peroxidase activity | IEP | Enrichment |
| MF | GO:0004602 | glutathione peroxidase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006629 | lipid metabolic process | IEP | Enrichment |
| BP | GO:0006979 | response to oxidative stress | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | Enrichment |
| BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | Enrichment |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Enrichment |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Enrichment |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Enrichment |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| MF | GO:0033743 | peptide-methionine (R)-S-oxide reductase activity | IEP | Enrichment |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | Enrichment |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:0098809 | nitrite reductase activity | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002937 | Amino_oxidase | 96 | 551 |
| No external refs found! |