1. Home
  2. Species
  3. Chlamydomonas reinhardtii
  4. Sequence
  5. Cre13.g587000

Cre13.g587000 (30784703)


Aliases : 30784703

No description available


Gene families : OG_01_0004569 (OrthoFinder) Phylogenetic Tree(s): OG0004569_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g587000
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cz15g03220.t1 No alias Apoptosis-antagonizing transcription factor, C-terminal;... 0.12 OrthoFinder
Dusal.0048s00003.1 33189501 Apoptosis-antagonizing transcription factor, C-terminal;... 0.05 OrthoFinder
OT_15G02830.1 No alias AATF leucine zipper-containing domain;... 0.2 OrthoFinder
PTI_02G02210.1 No alias Apoptosis-antagonizing transcription factor, C-terminal... 0.16 OrthoFinder
Sro11_g008700.1 Contig724.g8344 Apoptosis antagonizing transcription factor 0.26 OrthoFinder
TP15G00830.1 No alias Apoptosis-antagonizing transcription factor, C-terminal... 0.05 OrthoFinder
Transcript_contig_57860 57860 AATF leucine zipper-containing domain [Interproscan]. 0.06 OrthoFinder
XM_002508356.1 MICPUN_61752, 61752 AATF leucine zipper-containing domain;... 0.19 OrthoFinder
XM_003062881.1 MicpuC2_52855, 52855 AATF leucine zipper-containing domain;... 0.14 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61539.1_728 PRW61539 AATF isoform X1 0.05 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491948.1_4956 KAA8491948 Protein BFR2 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003724 RNA helicase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR025160 AATF 259 416
IPR012617 AATF_C 533 603
No external refs found!