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  5. Cre13.g566150

Cre13.g566150 (30784474)


Aliases : 30784474

No description available


Gene families : OG_01_0003507 (OrthoFinder) Phylogenetic Tree(s): OG0003507_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre13.g566150
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020556.30 tig00020556_g10998.t1 No description available 0.02 OrthoFinder
Cz02g27030.t1 No alias RNA 2-O ribose methyltransferase, substrate binding;... 0.02 OrthoFinder
OT_15G02460.1 No alias RNA 2-O ribose methyltransferase, substrate binding;... 0.04 OrthoFinder
PTI_17G02460.1 No alias RNA 2-O ribose methyltransferase, substrate binding;... 0.05 OrthoFinder
Sro2113_g315030.1 Contig664.g7838 TRNA/rRNA methyltransferase 0.03 OrthoFinder
XM_002505273.1 MICPUN_62715, 62715 tRNA/rRNA methyltransferase, SpoU type; RNA 2-O ribose... 0.04 OrthoFinder
XM_003060250.1 MicpuC2_59944, 59944 RNA 2-O ribose methyltransferase, substrate binding;... 0.02 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492923.1_2659 KAA8492923 RRNA methyltransferase 1, mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Enrichment
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR013123 SpoU_subst-bd 279 358
IPR001537 SpoU_MeTrfase 384 514
No external refs found!