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  5. Cre12.g550900

Cre12.g550900 (30793459, SSD3)


Aliases : 30793459, SSD3

No description available


Gene families : OG_01_0000125 (OrthoFinder) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g550900
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000204.95 tig00000204_g17761.t2 No description available 0.02 OrthoFinder
Dusal.0147s00006.1 33195559 Protein patched/dispatched [Interproscan]. 0.02 OrthoFinder
Transcript_contig_54505 54505 Niemann-Pick C1, N-terminal; Sterol-sensing domain;... 0.02 OrthoFinder
lcl|BLLF01000365.1_cds_GFH10996.1_5473 HaLaN_06417, GFH10996 SSD domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56197.1_9968 PRW56197 Niemann-Pick C1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR003392 Ptc/Disp 1396 1535
IPR032190 NPC1_N 65 311
IPR000731 SSD 781 931
No external refs found!