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  5. Cre12.g547700

Cre12.g547700 (30792899)


Aliases : 30792899

No description available


Gene families : OG_01_0000061 (OrthoFinder) Phylogenetic Tree(s): OG0000061_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g547700
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Vocar.0007s0203.1 32887988 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.03 OrthoFinder
Vocar.0064s0020.1 32897719 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000934.1_cds_GFH16023.1_10500 HaLaN_12367, GFH16023 Tubulin-tyrosine ligase/Tubulin polyglutamylase;... 0.02 OrthoFinder
lcl|BLLF01003987.1_cds_GFH28670.1_23147 HaLaN_27204, GFH28670 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Enrichment
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0019104 DNA N-glycosylase activity IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR004344 TTL/TTLL_fam 281 445
No external refs found!