Cre12.g524100 (30793624)

Aliases : 30793624

Description : RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component

Gene families : OG_01_0004541 (OrthoFinder) Phylogenetic Tree(s): OG0004541_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre12.g524100
Cluster	HCCA: Cluster_57

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021589.24	tig00021589_g22732.t1	RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA...	0.04	OrthoFinder
Cz05g13090.t1	No alias	MIF4G-like, type 2; MIF4G-like, type 3; MIF4G-like, type...	0.05	OrthoFinder
Dusal.0756s00003.1	33189157	MIF4G-like, type 2 [Interproscan].	0.02	OrthoFinder
Dusal.0756s00004.1	33189156	MIF4G-like, type 3 [Interproscan].	0.03	OrthoFinder
EOD22541	No alias	MIF4G-like, type 2 [Interproscan].	0.02	OrthoFinder
OT_07G01550.1	No alias	MIF4G-like, type 1; MIF4G-like, type 3; MIF4G-like, type...	0.02	OrthoFinder
Vocar.0006s0471.1	32894239	MIF4G-like, type 1 [Interproscan].	0.04	OrthoFinder
XM_002499537.1	MICPUN_56144, 56144	MIF4G-like, type 1; MIF4G-like, type 2; MIF4G-like, type...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000339	RNA cap binding	IEP	Enrichment
MF	GO:0000340	RNA 7-methylguanosine cap binding	IEP	Enrichment
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Enrichment
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Enrichment
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003677	DNA binding	IEP	Enrichment
MF	GO:0003712	transcription coregulator activity	IEP	Enrichment
MF	GO:0003714	transcription corepressor activity	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003916	DNA topoisomerase activity	IEP	Enrichment
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	Enrichment
MF	GO:0003989	acetyl-CoA carboxylase activity	IEP	Enrichment
MF	GO:0005488	binding	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
CC	GO:0005643	nuclear pore	IEP	Enrichment
BP	GO:0006259	DNA metabolic process	IEP	Enrichment
BP	GO:0006265	DNA topological change	IEP	Enrichment
BP	GO:0006351	transcription, DNA-templated	IEP	Enrichment
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Enrichment
BP	GO:0006633	fatty acid biosynthetic process	IEP	Enrichment
BP	GO:0006913	nucleocytoplasmic transport	IEP	Enrichment
BP	GO:0006996	organelle organization	IEP	Enrichment
MF	GO:0008094	ATPase, acting on DNA	IEP	Enrichment
BP	GO:0008380	RNA splicing	IEP	Enrichment
BP	GO:0016043	cellular component organization	IEP	Enrichment
MF	GO:0016421	CoA carboxylase activity	IEP	Enrichment
MF	GO:0016853	isomerase activity	IEP	Enrichment
MF	GO:0016885	ligase activity, forming carbon-carbon bonds	IEP	Enrichment
BP	GO:0032774	RNA biosynthetic process	IEP	Enrichment
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Enrichment
BP	GO:0051169	nuclear transport	IEP	Enrichment
BP	GO:0051276	chromosome organization	IEP	Enrichment
BP	GO:0071103	DNA conformation change	IEP	Enrichment
BP	GO:0071840	cellular component organization or biogenesis	IEP	Enrichment
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
BP	GO:0097659	nucleic acid-templated transcription	IEP	Enrichment
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Enrichment
MF	GO:0140110	transcription regulator activity	IEP	Enrichment
CC	GO:0140513	nuclear protein-containing complex	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR015174	MIF4G-like_typ-2	827	933
IPR015172	MIF4G-like_typ-1	522	647

External Links

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Cre12.g524100 (30793624)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation