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  5. Cre12.g517300

Cre12.g517300 (30792484)


Aliases : 30792484

Description : SUN domain-containing protein 5 OS=Arabidopsis thaliana


Gene families : OG_01_0003827 (OrthoFinder) Phylogenetic Tree(s): OG0003827_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g517300
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Cz02g14090.t1 No alias SUN domain [Interproscan]. 0.02 OrthoFinder
XM_002507816.1 MICPUN_60591, 60591 SUN domain [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01001957.1_cds_GFH22052.1_16529 HaLaN_19457, GFH22052 SUN domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR012919 SUN_dom 495 625
No external refs found!