Cre12.g514050 (30792611, GSF1)

Aliases : 30792611, GSF1

Description : Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamate synthase activities.Fd-dependent glutamate synthase

Gene families : OG_01_0000413 (OrthoFinder) Phylogenetic Tree(s): OG0000413_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cre12.g514050
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
Cz10g25220.t1	No alias	Glutamate synthase domain; Glutamate synthase,...	0.02	OrthoFinder
Dusal.0806s00001.1	33190345	Glutamate synthase, central-N; Glutamine...	0.06	OrthoFinder
EOD37258	No alias	Glutamine amidotransferase type 2 domain; Glutamate...	0.02	OrthoFinder
OT_14G02150.1	No alias	Glutamate synthase, alpha subunit, C-terminal; Glutamate...	0.02	OrthoFinder
PTI_01G06310.1	No alias	Glutamate synthase, alpha subunit, C-terminal; Glutamine...	0.02	OrthoFinder
PTI_22G02630.1	No alias	Glutamine amidotransferase type 2 domain; Glutamate...	0.02	OrthoFinder
Sro1010_g230810.1	Contig4560.g34046	Glutamate synthase 1 [NADH], chloroplastic	0.03	OrthoFinder
Sro1010_g230820.1	Contig4560.g34047	Glutamate synthase 1 [NADH], chloroplastic	0.04	OrthoFinder
Sro648_g181100.1	Contig423.g5681	Glutamate synthase 1 [NADH], chloroplastic	0.05	OrthoFinder
Sro785_g202150.1	Contig2407.g19693	Glutamate synthase 1 [NADH], chloroplastic	0.05	OrthoFinder
SymbC1.scaffold11044.1	11044.1	Glutamine amidotransferase type 2 domain; Glutamate...	0.01	OrthoFinder
SymbC1.scaffold1423.11	1423.11	FAD/NAD(P)-binding domain; Dihydroprymidine...	0.02	OrthoFinder
SymbC1.scaffold1423.12	1423.12	Glutamate synthase, alpha subunit, C-terminal; Glutamate...	0.01	OrthoFinder
SymbC1.scaffold588.8	588.8	Glutamate synthase, alpha subunit, C-terminal;...	0.03	OrthoFinder
TP06G05930.1	No alias	Dihydroprymidine dehydrogenase domain II;...	0.03	OrthoFinder
TP13G02310.1	No alias	Glutamate synthase, alpha subunit, C-terminal; Glutamate...	0.02	OrthoFinder
Transcript_contig_79066	79066	Glutamate synthase, central-N; Glutamine...	0.01	OrthoFinder
Transcript_contig_79331	79331	Glutamate synthase, central-N; Glutamate synthase domain...	0.02	OrthoFinder
XM_002501809.1	MICPUN_105473, 105473	Glutamate synthase (GLT)	0.02	OrthoFinder
lcl\|BLLF01000510.1_cds_GFH12496.1_6973	HaLaN_08200, GFH12496	Glutamate synthetase	0.02	OrthoFinder
lcl\|BLLF01001038.1_cds_GFH16698.1_11175	HaLaN_13171, GFH16698	Glutamate synthetase	0.03	OrthoFinder
lcl\|BLLF01007426.1_cds_GFH32946.1_27423	HaLaN_32246, GFH32946	Glutamate synthetase	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006536	glutamate metabolic process	None	Extended
BP	GO:0006537	glutamate biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009064	glutamine family amino acid metabolic process	None	Extended
BP	GO:0009084	glutamine family amino acid biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015930	glutamate synthase activity	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	Interproscan
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043648	dicarboxylic acid metabolic process	None	Extended
BP	GO:0043650	dicarboxylic acid biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Enrichment
MF	GO:0000287	magnesium ion binding	IEP	Enrichment
MF	GO:0000295	adenine nucleotide transmembrane transporter activity	IEP	Enrichment
MF	GO:0003993	acid phosphatase activity	IEP	Enrichment
MF	GO:0004018	N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	IEP	Enrichment
MF	GO:0004325	ferrochelatase activity	IEP	Enrichment
MF	GO:0004408	holocytochrome-c synthase activity	IEP	Enrichment
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Enrichment
MF	GO:0004620	phospholipase activity	IEP	Enrichment
MF	GO:0004743	pyruvate kinase activity	IEP	Enrichment
MF	GO:0004819	glutamine-tRNA ligase activity	IEP	Enrichment
MF	GO:0005215	transporter activity	IEP	Enrichment
MF	GO:0005216	ion channel activity	IEP	Enrichment
MF	GO:0005244	voltage-gated ion channel activity	IEP	Enrichment
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Enrichment
MF	GO:0005253	anion channel activity	IEP	Enrichment
MF	GO:0005254	chloride channel activity	IEP	Enrichment
MF	GO:0005346	purine ribonucleotide transmembrane transporter activity	IEP	Enrichment
MF	GO:0005347	ATP transmembrane transporter activity	IEP	Enrichment
MF	GO:0005471	ATP:ADP antiporter activity	IEP	Enrichment
MF	GO:0005488	binding	IEP	Enrichment
BP	GO:0006090	pyruvate metabolic process	IEP	Enrichment
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Enrichment
BP	GO:0006096	glycolytic process	IEP	Enrichment
BP	GO:0006099	tricarboxylic acid cycle	IEP	Enrichment
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	Enrichment
BP	GO:0006166	purine ribonucleoside salvage	IEP	Enrichment
BP	GO:0006190	inosine salvage	IEP	Enrichment
BP	GO:0006757	ATP generation from ADP	IEP	Enrichment
BP	GO:0006810	transport	IEP	Enrichment
BP	GO:0006820	anion transport	IEP	Enrichment
BP	GO:0006821	chloride transport	IEP	Enrichment
BP	GO:0006862	nucleotide transport	IEP	Enrichment
MF	GO:0008308	voltage-gated anion channel activity	IEP	Enrichment
MF	GO:0008509	anion transmembrane transporter activity	IEP	Enrichment
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	Enrichment
MF	GO:0008531	riboflavin kinase activity	IEP	Enrichment
MF	GO:0008686	3,4-dihydroxy-2-butanone-4-phosphate synthase activity	IEP	Enrichment
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Enrichment
BP	GO:0009116	nucleoside metabolic process	IEP	Enrichment
BP	GO:0009119	ribonucleoside metabolic process	IEP	Enrichment
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	Enrichment
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	Enrichment
BP	GO:0009163	nucleoside biosynthetic process	IEP	Enrichment
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	Enrichment
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	Enrichment
MF	GO:0015075	ion transmembrane transporter activity	IEP	Enrichment
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Enrichment
MF	GO:0015215	nucleotide transmembrane transporter activity	IEP	Enrichment
MF	GO:0015216	purine nucleotide transmembrane transporter activity	IEP	Enrichment
MF	GO:0015217	ADP transmembrane transporter activity	IEP	Enrichment
MF	GO:0015267	channel activity	IEP	Enrichment
MF	GO:0015301	anion:anion antiporter activity	IEP	Enrichment
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Enrichment
MF	GO:0015605	organophosphate ester transmembrane transporter activity	IEP	Enrichment
BP	GO:0015698	inorganic anion transport	IEP	Enrichment
BP	GO:0015748	organophosphate ester transport	IEP	Enrichment
BP	GO:0015931	nucleobase-containing compound transport	IEP	Enrichment
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Enrichment
BP	GO:0015977	carbon fixation	IEP	Enrichment
BP	GO:0016052	carbohydrate catabolic process	IEP	Enrichment
MF	GO:0016298	lipase activity	IEP	Enrichment
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Enrichment
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Enrichment
MF	GO:0016829	lyase activity	IEP	Enrichment
MF	GO:0016830	carbon-carbon lyase activity	IEP	Enrichment
MF	GO:0016831	carboxy-lyase activity	IEP	Enrichment
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Enrichment
MF	GO:0016842	amidine-lyase activity	IEP	Enrichment
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Enrichment
MF	GO:0016887	ATPase	IEP	Enrichment
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Enrichment
MF	GO:0022803	passive transmembrane transporter activity	IEP	Enrichment
MF	GO:0022804	active transmembrane transporter activity	IEP	Enrichment
MF	GO:0022832	voltage-gated channel activity	IEP	Enrichment
MF	GO:0022836	gated channel activity	IEP	Enrichment
MF	GO:0022853	active ion transmembrane transporter activity	IEP	Enrichment
MF	GO:0022857	transmembrane transporter activity	IEP	Enrichment
BP	GO:0034404	nucleobase-containing small molecule biosynthetic process	IEP	Enrichment
BP	GO:0042278	purine nucleoside metabolic process	IEP	Enrichment
BP	GO:0042451	purine nucleoside biosynthetic process	IEP	Enrichment
BP	GO:0042455	ribonucleoside biosynthetic process	IEP	Enrichment
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Enrichment
BP	GO:0043094	cellular metabolic compound salvage	IEP	Enrichment
BP	GO:0043101	purine-containing compound salvage	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
MF	GO:0043169	cation binding	IEP	Enrichment
BP	GO:0043174	nucleoside salvage	IEP	Enrichment
BP	GO:0046031	ADP metabolic process	IEP	Enrichment
BP	GO:0046102	inosine metabolic process	IEP	Enrichment
BP	GO:0046103	inosine biosynthetic process	IEP	Enrichment
BP	GO:0046128	purine ribonucleoside metabolic process	IEP	Enrichment
BP	GO:0046129	purine ribonucleoside biosynthetic process	IEP	Enrichment
MF	GO:0046872	metal ion binding	IEP	Enrichment
BP	GO:0046939	nucleotide phosphorylation	IEP	Enrichment
BP	GO:0051179	localization	IEP	Enrichment
BP	GO:0051234	establishment of localization	IEP	Enrichment
BP	GO:0072521	purine-containing compound metabolic process	IEP	Enrichment
CC	GO:0110165	cellular anatomical entity	IEP	Enrichment
MF	GO:0140323	solute:anion antiporter activity	IEP	Enrichment
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Enrichment
MF	GO:1901265	nucleoside phosphate binding	IEP	Enrichment
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Enrichment
BP	GO:1901657	glycosyl compound metabolic process	IEP	Enrichment
BP	GO:1901659	glycosyl compound biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR006982	Glu_synth_centr_N	557	848
IPR002932	Glu_synthdom	908	1298
IPR002489	Glu_synth_asu_C	1378	1562
IPR017932	GATase_2_dom	104	527

External Links

No external refs found!

Cre12.g514050 (30792611, GSF1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation