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  5. Cre12.g494900

Cre12.g494900 (30792295)


Aliases : 30792295

Description : Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP4 phosphatase complex.catalytic component (PP4c)


Gene families : OG_01_0000205 (OrthoFinder) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g494900
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001384.5 tig00001384_g8554.t1 Putative serine/threonine-protein phosphatase PP2A-4... 0.02 OrthoFinder
Cpa|evm.model.tig00020684.31 tig00020684_g12880.t1 Serine/threonine-protein phosphatase PP-X isozyme 2... 0.02 OrthoFinder
Cz02g14230.t1 No alias Calcineurin-like phosphoesterase domain, ApaH type... 0.02 OrthoFinder
Cz10g19200.t1 No alias Calcineurin-like phosphoesterase domain, ApaH type... 0.02 OrthoFinder
Dusal.0046s00033.1 33197226 Calcineurin-like phosphoesterase domain, ApaH type... 0.02 OrthoFinder
Dusal.0601s00001.1 33190754 Calcineurin-like phosphoesterase domain, ApaH type... 0.03 OrthoFinder
EOD37367 No alias Calcineurin-like phosphoesterase domain, ApaH type... 0.02 OrthoFinder
Sro353_g124460.1 Contig1923.g16580 Phytochrome-associated serine/threonine-protein phosphatase 0.04 OrthoFinder
Sro361_g126570.1 Contig1094.g10582 Phytochrome-associated serine/threonine-protein phosphatase 0.01 OrthoFinder
TP03G04820.1 No alias Calcineurin-like phosphoesterase domain, ApaH type... 0.02 OrthoFinder
Transcript_contig_58134 58134 Calcineurin-like phosphoesterase domain, ApaH type... 0.02 OrthoFinder
Transcript_contig_61240 61240 Calcineurin-like phosphoesterase domain, ApaH type... 0.03 OrthoFinder
XM_002503698.1 MICPUN_60369, 60369 Calcineurin-like phosphoesterase domain, ApaH type... 0.03 OrthoFinder
XM_003059785.1 MicpuC2_59555, 59555 Calcineurin-like phosphoesterase domain, ApaH type... 0.03 OrthoFinder
lcl|BLLF01002879.1_cds_GFH25656.1_20133 HaLaN_23655, GFH25656 Serine/threonine-protein phosphatase 0.03 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60266.1_4301 PRW60266 Serine threonine-phosphatase 2A catalytic subunit beta isoform 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498965.1_7918 KAA8498965 Phytochrome-associated serine/threonine-protein phosphatase 3 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR004843 Calcineurin-like_PHP_ApaH 48 239
No external refs found!