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Aliases : 30793142, CPS2
Description : RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF100/Ydh1 component
Gene families : OG_01_0003818 (OrthoFinder) Phylogenetic Tree(s): OG0003818_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre12.g487600 | |
| Cluster | HCCA: Cluster_57 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| EOD27805 | No alias | Beta-Casp domain; Cleavage and polyadenylation... | 0.02 | OrthoFinder | |
| Sro121_g058990.1 | Contig1619.g14653 | Probable cleavage and polyadenylation specificity factor... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | Enrichment |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003684 | damaged DNA binding | IEP | Enrichment |
| MF | GO:0003712 | transcription coregulator activity | IEP | Enrichment |
| MF | GO:0003714 | transcription corepressor activity | IEP | Enrichment |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Enrichment |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | Enrichment |
| MF | GO:0003989 | acetyl-CoA carboxylase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006265 | DNA topological change | IEP | Enrichment |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Enrichment |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0008380 | RNA splicing | IEP | Enrichment |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Enrichment |
| BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| MF | GO:0016421 | CoA carboxylase activity | IEP | Enrichment |
| BP | GO:0016579 | protein deubiquitination | IEP | Enrichment |
| MF | GO:0016885 | ligase activity, forming carbon-carbon bonds | IEP | Enrichment |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0045892 | negative regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0048523 | negative regulation of cellular process | IEP | Enrichment |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
| BP | GO:0051253 | negative regulation of RNA metabolic process | IEP | Enrichment |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Enrichment |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
| BP | GO:0071103 | DNA conformation change | IEP | Enrichment |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Enrichment |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
| CC | GO:0099023 | vesicle tethering complex | IEP | Enrichment |
| MF | GO:0140110 | transcription regulator activity | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| BP | GO:1902679 | negative regulation of RNA biosynthetic process | IEP | Enrichment |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
| BP | GO:1903507 | negative regulation of nucleic acid-templated transcription | IEP | Enrichment |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
| No external refs found! |