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  5. Cre12.g486050

Cre12.g486050 (30792310)


Aliases : 30792310

No description available


Gene families : OG_01_0007777 (OrthoFinder) Phylogenetic Tree(s): OG0007777_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre12.g486050
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Dusal.0383s00002.1 33199476 Zinc finger, CCHC-type [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58093.1_7945 PRW58093 E3 ubiquitin-ligase Su(dx)-like 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
CC GO:0005849 mRNA cleavage factor complex IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR001202 WW_dom 124 153
IPR001878 Znf_CCHC 17 33
No external refs found!