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Aliases : 30776009
No description available
Gene families : OG_01_0004526 (OrthoFinder) Phylogenetic Tree(s): OG0004526_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre11.g481900 | |
| Cluster | HCCA: Cluster_57 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz02g01220.t1 | No alias | RNA polymerase II-binding domain [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0695s00002.1 | 33201552 | RNA polymerase II-binding domain [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_11G03040.1 | No alias | RNA polymerase II-binding domain [Interproscan]. | 0.01 | OrthoFinder | |
| Transcript_contig_55973 | 55973 | RNA polymerase II-binding domain [Interproscan]. | 0.01 | OrthoFinder | |
| Vocar.0048s0004.1 | 32893663 | RNA polymerase II-binding domain [Interproscan]. | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000228 | nuclear chromosome | IEP | Enrichment |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003714 | transcription corepressor activity | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Enrichment |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| CC | GO:0005643 | nuclear pore | IEP | Enrichment |
| CC | GO:0005694 | chromosome | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006265 | DNA topological change | IEP | Enrichment |
| BP | GO:0006325 | chromatin organization | IEP | Enrichment |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Enrichment |
| BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Enrichment |
| BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Enrichment |
| BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0008380 | RNA splicing | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0010921 | regulation of phosphatase activity | IEP | Enrichment |
| BP | GO:0016043 | cellular component organization | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016569 | covalent chromatin modification | IEP | Enrichment |
| BP | GO:0016570 | histone modification | IEP | Enrichment |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Enrichment |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Enrichment |
| BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
| MF | GO:0019899 | enzyme binding | IEP | Enrichment |
| MF | GO:0019902 | phosphatase binding | IEP | Enrichment |
| MF | GO:0019903 | protein phosphatase binding | IEP | Enrichment |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031399 | regulation of protein modification process | IEP | Enrichment |
| BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0035303 | regulation of dephosphorylation | IEP | Enrichment |
| BP | GO:0035304 | regulation of protein dephosphorylation | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Enrichment |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Enrichment |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Enrichment |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | Enrichment |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0065009 | regulation of molecular function | IEP | Enrichment |
| BP | GO:0071103 | DNA conformation change | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |