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Aliases : 30775827
Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP14 assembly factor
Gene families : OG_01_0001582 (OrthoFinder) Phylogenetic Tree(s): OG0001582_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cre11.g478950 | |
| Cluster | HCCA: Cluster_18 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020554.20 | tig00020554_g10806.t1 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder | |
| Cpa|evm.model.tig00020554.21 | tig00020554_g10806.t1 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.01 | OrthoFinder | |
| Cz02g05190.t1 | No alias | Utp14 protein [Interproscan]. | 0.12 | OrthoFinder | |
| Dusal.0072s00013.1 | 33199054 | Utp14 protein [Interproscan]. | 0.08 | OrthoFinder | |
| EOD14154 | No alias | Utp14 protein [Interproscan]. | 0.13 | OrthoFinder | |
| EOD34678 | No alias | Utp14 protein [Interproscan]. | 0.09 | OrthoFinder | |
| OT_04G00780.1 | No alias | Utp14 protein [Interproscan]. | 0.2 | OrthoFinder | |
| PTI_28G00410.1 | No alias | Utp14 protein [Interproscan]. | 0.17 | OrthoFinder | |
| Sro54_g031940.1 | Contig2430.g19882 | Associated protein 14 homolog A | 0.22 | OrthoFinder | |
| TP02G07320.1 | No alias | Utp14 protein [Interproscan]. | 0.14 | OrthoFinder | |
| Transcript_contig_55120 | 55120 | Utp14 protein [Interproscan]. | 0.11 | OrthoFinder | |
| Transcript_contig_70128 | 70128 | Hypothetical protein | 0.07 | OrthoFinder | |
| Vocar.0027s0003.1 | 32887208 | Utp14 protein [Interproscan]. | 0.08 | OrthoFinder | |
| XM_002504361.1 | MICPUN_102467, 102467 | Utp14 protein [Interproscan]. | 0.11 | OrthoFinder | |
| XM_003064738.1 | MicpuC2_43608, 43608 | Utp14 protein [Interproscan]. | 0.12 | OrthoFinder | |
| lcl|BLLF01000400.1_cds_GFH11414.1_5891 | HaLaN_06907, GFH11414 | Utp14 protein [Interproscan]. | 0.04 | OrthoFinder | |
| lcl|BLLF01002319.1_cds_GFH23636.1_18113 | HaLaN_21277, GFH23636 | Utp14 protein [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01005829.1_cds_GFH31682.1_26159 | HaLaN_30771, GFH31682 | U3 small nucleolar RNA-associated 14-like protein A | 0.13 | OrthoFinder | |
| lcl|BLLF01005829.1_cds_GFH31683.1_26160 | HaLaN_30772, GFH31683 | Utp14 protein [Interproscan]. | 0.08 | OrthoFinder | |
| lcl|LHPG02000010.1_cds_PRW50835.1_983 | PRW50835 | U3 small nucleolar RNA-associated 14-like protein A | 0.21 | OrthoFinder | |
| lcl|VRMN01000003.1_cds_KAA8496059.1_2057 | KAA8496059 | U3 small nucleolar RNA-associated protein 14-like A | 0.08 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Enrichment |
| BP | GO:0001510 | RNA methylation | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003724 | RNA helicase activity | IEP | Enrichment |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0004540 | ribonuclease activity | IEP | Enrichment |
| MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| CC | GO:0005730 | nucleolus | IEP | Enrichment |
| CC | GO:0005732 | sno(s)RNA-containing ribonucleoprotein complex | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006397 | mRNA processing | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006400 | tRNA modification | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0008033 | tRNA processing | IEP | Enrichment |
| MF | GO:0008134 | transcription factor binding | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009451 | RNA modification | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Enrichment |
| MF | GO:0016426 | tRNA (adenine) methyltransferase activity | IEP | Enrichment |
| MF | GO:0016429 | tRNA (adenine-N1-)-methyltransferase activity | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
| BP | GO:0030488 | tRNA methylation | IEP | Enrichment |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| BP | GO:0032259 | methylation | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
| MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |