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  5. Cre10.g455600

Cre10.g455600 (30789958, ORC1)


Aliases : 30789958, ORC1

Description : Cell cycle.interphase.DNA replication.preinitiation.origin recognition complex.ORC1 component


Gene families : OG_01_0000811 (OrthoFinder) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre10.g455600
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000737.5 tig00000737_g3785.t1 Cell cycle.interphase.DNA... 0.03 OrthoFinder
Cpa|evm.model.tig00021070.70 tig00021070_g17875.t1 Cell cycle.interphase.DNA replication.preinitiation.CDC6... 0.03 OrthoFinder
Cz11g11020.t1 No alias Cdc6, C-terminal; AAA+ ATPase domain [Interproscan]. 0.07 OrthoFinder
EOD12119 No alias Bromo adjacent homology (BAH) domain; ATPase, AAA-type,... 0.04 OrthoFinder
EOD31487 No alias Zinc finger, PHD-finger [Interproscan]. 0.07 OrthoFinder
OT_04G00200.1 No alias Forkhead-associated (FHA) domain [Interproscan]. 0.02 OrthoFinder
OT_04G01060.1 No alias Methyl-CpG DNA binding; AAA+ ATPase domain; Cdc6,... 0.09 OrthoFinder
OT_04G05240.1 No alias Zinc finger, PHD-finger; Bromo adjacent homology (BAH)... 0.06 OrthoFinder
PTI_01G02210.1 No alias AAA+ ATPase domain [Interproscan]. 0.02 OrthoFinder
PTI_07G04060.1 No alias Hypothetical protein 0.02 OrthoFinder
Sro395_g133970.1 Contig4272.g32316 Complex subunit 0.02 OrthoFinder
TP06G00210.1 No alias ATPase, AAA-type, core [Interproscan]. 0.01 OrthoFinder
TP10G03100.1 No alias ATPase, AAA-type, core [Interproscan]. 0.03 OrthoFinder
Transcript_contig_55058 55058 Zinc finger, PHD-finger; Bromo adjacent homology (BAH)... 0.03 OrthoFinder
Vocar.0030s0099.1 32894601 Zinc finger, PHD-finger; ATPase, AAA-type, core; AAA lid... 0.06 OrthoFinder
Vocar.0063s0024.1 32883486 Hypothetical protein 0.02 OrthoFinder
XM_002501862.1 MICPUN_81192, 81192 Cdc6, C-terminal; AAA+ ATPase domain [Interproscan]. 0.07 OrthoFinder
XM_002506404.1 MICPUN_88660, 88660 AAA lid domain; Zinc finger, PHD-finger; ATPase,... 0.05 OrthoFinder
XM_003057583.1 MicpuC2_2525, 2525 Cdc6, C-terminal; Orc1-like, AAA ATPase domain [Interproscan]. 0.03 OrthoFinder
XM_003063314.1 MicpuC2_36249, 36249 AAA lid domain; Zinc finger, PHD-finger; Orc1-like, AAA... 0.03 OrthoFinder
lcl|BLLF01000446.1_cds_GFH11894.1_6371 HaLaN_07472, GFH11894 Origin recognition complex subunit 1 0.07 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61222.1_121 PRW61222 Origin recognition complex subunit 1 0.08 OrthoFinder
lcl|LHPG02000027.1_cds_PRW05904.1_5920 PRW05904 Cell division control 6 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 607 743
IPR019787 Znf_PHD-finger 256 301
No external refs found!