Aliases : 30790122
Description : RNA biosynthesis.transcriptional activation.Alfin-like transcription factor
Gene families : OG_01_0004099 (OrthoFinder) Phylogenetic Tree(s): OG0004099_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cre10.g441050 | |
Cluster | HCCA: Cluster_106 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Transcript_contig_55152 | 55152 | Alfin [Interproscan]. | 0.04 | OrthoFinder | |
Vocar.0021s0161.1 | 32895897 | Lamin-B receptor of TUDOR domain; Alfin [Interproscan]. | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
MF | GO:0003674 | molecular_function | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0003824 | catalytic activity | IEP | Enrichment |
MF | GO:0004672 | protein kinase activity | IEP | Enrichment |
MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Enrichment |
MF | GO:0005244 | voltage-gated ion channel activity | IEP | Enrichment |
MF | GO:0005247 | voltage-gated chloride channel activity | IEP | Enrichment |
MF | GO:0005253 | anion channel activity | IEP | Enrichment |
MF | GO:0005254 | chloride channel activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005515 | protein binding | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
CC | GO:0005667 | transcription regulator complex | IEP | Enrichment |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Enrichment |
BP | GO:0006397 | mRNA processing | IEP | Enrichment |
BP | GO:0006821 | chloride transport | IEP | Enrichment |
MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Enrichment |
MF | GO:0008308 | voltage-gated anion channel activity | IEP | Enrichment |
BP | GO:0008380 | RNA splicing | IEP | Enrichment |
MF | GO:0008509 | anion transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015267 | channel activity | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
MF | GO:0016301 | kinase activity | IEP | Enrichment |
MF | GO:0016740 | transferase activity | IEP | Enrichment |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | Enrichment |
MF | GO:0022832 | voltage-gated channel activity | IEP | Enrichment |
MF | GO:0022836 | gated channel activity | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
MF | GO:0046983 | protein dimerization activity | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR021998 | Alfin_N | 6 | 129 |
No external refs found! |