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  5. Cpa|evm.model.tig00000405.21

Cpa|evm.model.tig00000405.21 (tig00000405_g453.t1)


Aliases : tig00000405_g453.t1

No description available


Gene families : OG_01_0000077 (OrthoFinder) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000405.21
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000254.3 tig00000254_g22448.t1 No description available 0.06 OrthoFinder
Cpa|evm.model.tig00000254.4 tig00000254_g22450.t1 No description available 0.05 OrthoFinder
Cpa|evm.model.tig00000498.13 tig00000498_g1589.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000769.24 tig00000769_g4018.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000882.13 tig00000882_g5258.t1 No description available 0.03 OrthoFinder
Cre10.g444850 30790145, CAV7 No description available 0.03 OrthoFinder
Cre12.g532350 30792883, CAV8 No description available 0.02 OrthoFinder
Cre16.g667350 30778190, CAV6 No description available 0.03 OrthoFinder
Cre16.g667451 30777477 No description available 0.03 OrthoFinder
Cre17.g720600 30782719, CAV1 No description available 0.04 OrthoFinder
Dusal.0044s00007.1 33194913 Ion transport domain [Interproscan]. 0.03 OrthoFinder
Dusal.0504s00014.1 33188690 Ion transport domain [Interproscan]. 0.02 OrthoFinder
Dusal.0504s00016.1 33188695 Ion transport domain [Interproscan]. 0.02 OrthoFinder
EOD26760 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
OT_01G01330.1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
OT_01G06690.1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
Vocar.0004s0321.1 32889539 Ion transport domain [Interproscan]. 0.02 OrthoFinder
Vocar.0017s0009.1 32891450 Ion transport domain [Interproscan]. 0.03 OrthoFinder
Vocar.0066s0019.1 32891735 Ion transport domain [Interproscan]. 0.03 OrthoFinder
XM_003056769.1 MicpuC2_32293, 32293 Voltage-gated ion channel superfamily 0.03 OrthoFinder
XM_003062221.1 MicpuC2_21063, 21063 Voltage-gated ion channel superfamily 0.02 OrthoFinder
lcl|BLLF01000397.1_cds_GFH11377.1_5854 HaLaN_06864, GFH11377 EF-hand domain-containing protein 0.01 OrthoFinder
lcl|BLLF01000397.1_cds_GFH11379.1_5856 HaLaN_06866, GFH11379 Ion transport domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000792.1_cds_GFH14993.1_9470 HaLaN_11140, GFH14993 Ion transport domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000954.1_cds_GFH16151.1_10628 HaLaN_12520, GFH16151 Voltage-gated Ca2+ channel, alpha subunit 0.03 OrthoFinder
lcl|BLLF01002156.1_cds_GFH22929.1_17406 HaLaN_20465, GFH22929 Voltage-gated Ca2+ channel, alpha subunit 0.02 OrthoFinder
lcl|BLLF01003644.1_cds_GFH27847.1_22324 HaLaN_26231, GFH27847 Ion transport domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01004618.1_cds_GFH29963.1_24440 HaLaN_28722, GFH29963 Voltage-gated Ca2+ channel, alpha subunit 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 154 438
IPR005821 Ion_trans_dom 1218 1449
IPR005821 Ion_trans_dom 548 694
IPR005821 Ion_trans_dom 918 1162
No external refs found!