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  5. Cre09.g399550

Cre09.g399550 (30780515)


Aliases : 30780515

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).Lys-63-linked polyubiquitination.RGLG ligating E3 protein


Gene families : OG_01_0000243 (OrthoFinder) Phylogenetic Tree(s): OG0000243_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g399550
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Cz05g33090.t1 No alias Copine; U box domain [Interproscan]. 0.02 OrthoFinder
PTI_01G07450.1 No alias C2 domain; Copine [Interproscan]. 0.02 OrthoFinder
Sro2415_g326840.1 Contig2132.g17978 Copine-1 0.01 OrthoFinder
Sro421_g139480.1 Contig1157.g11061 Nicotinic receptor-associated protein 1 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496663.1_392 KAA8496663 Copine-A 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen IEP Enrichment
InterPro domains Description Start Stop
IPR010734 Copine_C 90 304
IPR003613 Ubox_domain 454 524
No external refs found!