Cre09.g398104 (30780603)


Aliases : 30780603

Description : RNA processing.RNA modification.rRNA/tRNA methylation.rRNA guanosine methyltransferase (RID2/Bud23/WBSCR22)


Gene families : OG_01_0001958 (OrthoFinder) Phylogenetic Tree(s): OG0001958_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g398104
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
EOD05571 No alias Methyltransferase type 11; 18S rRNA... 0.02 OrthoFinder
OT_05G00380.1 No alias Methyltransferase domain 25; 18S rRNA... 0.03 OrthoFinder
PTI_22G02270.1 No alias 18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23,... 0.03 OrthoFinder
Sro2_g001730.1 Contig467.g6331 Probable 18S rRNA (guanine-N(7))-methyltransferase 0.06 OrthoFinder
TP06G00730.1 No alias 18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23,... 0.04 OrthoFinder
Transcript_contig_54738 54738 18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23,... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016435 rRNA (guanine) methyltransferase activity IEA Interproscan
BP GO:0070476 rRNA (guanine-N7)-methylation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR022238 Bud23_C 204 287
IPR013216 Methyltransf_11 58 156
No external refs found!