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  5. Cpa|evm.model.tig00000404.33

Cpa|evm.model.tig00000404.33 (tig00000404_g396.t1)


Aliases : tig00000404_g396.t1

Description : Protein biosynthesis.organelle translation machineries.translation elongation.EF-P elongation factor


Gene families : OG_01_0001087 (OrthoFinder) Phylogenetic Tree(s): OG0001087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000404.33
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Dusal.0150s00015.1 33196068 Elongation factor P, C-terminal; Translation elongation... 0.02 OrthoFinder
PTI_31G00220.1 No alias Translation elongation factor, KOW-like; Elongation... 0.01 OrthoFinder
TP01G10300.1 No alias Translation elongation factor P/YeiP, central;... 0.02 OrthoFinder
XM_003062271.1 MicpuC2_52036, 52036 Translation elongation factor, KOW-like; Elongation... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0043043 peptide biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003937 IMP cyclohydrolase activity IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR013185 Transl_elong_KOW-like 64 120
IPR015365 Elong-fact-P_C 188 243
IPR001059 Transl_elong_P/YeiP_cen 127 179
No external refs found!