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  5. Cre09.g394100

Cre09.g394100 (30781425, AP1S1)


Aliases : 30781425, AP1S1

Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1S small sigma subunit


Gene families : OG_01_0000426 (OrthoFinder) Phylogenetic Tree(s): OG0000426_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g394100
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001003.32 tig00001003_g6287.t1 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder
Cz01g45020.t1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.06 OrthoFinder
Dusal.0208s00019.1 33194114 AP complex, mu/sigma subunit [Interproscan]. 0.05 OrthoFinder
EOD06805 No alias Aps1, sigma subunit of the adaptin 1 complex [Ensembl]. 0.08 OrthoFinder
EOD24106 No alias Adaptor protein 2 sigma subunit [Ensembl]. 0.03 OrthoFinder
EOD33030 No alias Adaptor protein 2 sigma subunit [Ensembl]. 0.03 OrthoFinder
EOD33031 No alias Adaptor protein 2 sigma subunit [Ensembl]. 0.03 OrthoFinder
OT_10G02560.1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
OT_10G02930.1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.03 OrthoFinder
Sro782_g201730.1 Contig2391.g19597 AP-2 complex subunit sigma 0.04 OrthoFinder
Sro9_g007570.1 Contig4120.g31525 AP-1 complex subunit sigma 0.04 OrthoFinder
TP04G02440.1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
TP05G06610.1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.05 OrthoFinder
Transcript_contig_55878 55878 AP complex, mu/sigma subunit [Interproscan]. 0.03 OrthoFinder
UNPLg00105.t1 No alias AP complex, mu/sigma subunit [Interproscan]. 0.03 OrthoFinder
XM_002503387.1 MICPUN_83744, 83744 AP complex, mu/sigma subunit [Interproscan]. 0.08 OrthoFinder
XM_003055645.1 MicpuC2_24442, 24442 AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
XM_003061069.1 MicpuC2_45744, 45744 AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000006.1_cds_PRW58003.1_8612 PRW58003 AP-1 complex subunit sigma-1 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 1 141
No external refs found!