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  5. Cre09.g387171

Cre09.g387171 (30780922)


Aliases : 30780922

Description : Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase


Gene families : OG_01_0004887 (OrthoFinder) Phylogenetic Tree(s): OG0004887_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cre09.g387171
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020553.161 tig00020553_g10653.t1 Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder
Cz04g11170.t1 No alias NAD-dependent epimerase/dehydratase [Interproscan]. 0.06 OrthoFinder
Dusal.1013s00001.1 33187812 RmlD-like substrate binding domain [Interproscan]. 0.02 OrthoFinder
UNPLg00346.t1 No alias NAD-dependent epimerase/dehydratase [Interproscan]. 0.06 OrthoFinder
lcl|BLLF01000131.1_cds_GFH08004.1_2481 HaLaN_02898, GFH08004 Epimerase domain-containing protein 0.04 OrthoFinder
lcl|BLLF01002064.1_cds_GFH22552.1_17029 HaLaN_20032, GFH22552 RmlD_sub_bind domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60227.1_4122 PRW60227 Rhamnose biosynthetic enzyme 1 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0004615 phosphomannomutase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR029903 RmlD-like-bd 15 185
No external refs found!