1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00000403.78

Cpa|evm.model.tig00000403.78 (tig00000403_g338.t1)


Aliases : tig00000403_g338.t1

Description : Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN8 regulatory component


Gene families : OG_01_0003025 (OrthoFinder) Phylogenetic Tree(s): OG0003025_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000403.78
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Cre06.g278256 30779235, RPN8 Protein degradation.26S proteasome.regulatory... 0.12 OrthoFinder
Cz09g10100.t1 No alias Rpn11/EIF3F, C-terminal [Interproscan]. 0.05 OrthoFinder
Dusal.0079s00015.1 33199427 Rpn11/EIF3F, C-terminal; JAB1/MPN/MOV34 metalloenzyme... 0.02 OrthoFinder
OT_06G03930.1 No alias Rpn11/EIF3F, C-terminal; JAB1/MPN/MOV34 metalloenzyme... 0.05 OrthoFinder
PTI_01G01810.1 No alias JAB1/MPN/MOV34 metalloenzyme domain; Rpn11/EIF3F,... 0.02 OrthoFinder
Sro1985_g309420.1 Contig949.g9798 ATPase regulatory subunit 7 homolog B 0.08 OrthoFinder
TP06G02090.1 No alias JAB1/MPN/MOV34 metalloenzyme domain; Rpn11/EIF3F,... 0.07 OrthoFinder
Transcript_contig_55600 55600 Rpn11/EIF3F, C-terminal; JAB1/MPN/MOV34 metalloenzyme... 0.03 OrthoFinder
Vocar.0012s0064.1 32894778 Rpn11/EIF3F, C-terminal; JAB1/MPN/MOV34 metalloenzyme... 0.05 OrthoFinder
XM_003058212.1 MicpuC2_70833, 70833 Mov34/MPN/PAD-1 family protein 0.06 OrthoFinder
lcl|BLLF01000072.1_cds_GFH07068.1_1545 HaLaN_01818, GFH07068 MPN domain-containing protein 0.03 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492984.1_2720 KAA8492984 26S proteasome non-ATPase regulatory subunit 7-like A 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003756 protein disulfide isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 18 127
IPR024969 Rpn11/EIF3F_C 176 287
No external refs found!